Well, for a first time mom, this is not unheard of ... sometimes they don't get it all in the right order ... some dontveven pull the fur until 2-3 days after kindling.
IMHO anything you can do to help her be a successful mom this time makes for a better mom next time.
The bleeding would be more concerning for me as it may indicate a retained kit which could be deadly to the doe or prevent her from breeding in the future. Other than veterinarian intervention, I have no suggestions that might help.
As for the babies, I have successfully supplemented several runts by flipping the doe. To start, place the doe on your lap in a quiet area. I started out with a towel on my lap. I also put the babies in a small basket at my side.
Stroke the doe from the tip of her nose up and over between her ears. This should be a smooth, gentle rhythmic motion. Watch the does eyes and look for them to relax and seem to unfocused.
Once the doe has relaxed, turn her onto her back in your lap and trance her again. Soon, you will be able to start with her on her back. I also like her head on my knees and her back feet in my middle.
Now that she is trances, take one kit and place it on a teat. You will want to keep your hand on it until it latches on. Next is to see if the doe is going to let her milk down. Keeping the kit moving between the nipples is common to how they feed normally, so even if the kit doesn't get a lot of milk from any one teat, it can still get a good enough portion. Cycle through the kits and the doe should relax enough to let her milk down.
As for seeing a doe nurse her kits in the cage, well, no, she doesn't want you to see her babies LOL keeping them hidden in the wild is how they stay safe. But she can get used to you handling the kits, so start out how you want them to tolerate